Darwin Docs https://darwin.bioeng.ru/ 2026-04-16T12:40:38+00:00 Darwin Docs https://darwin.bioeng.ru/ https://darwin.bioeng.ru/lib/exe/fetch.php?media=favicon.ico text/html 2026-03-13T15:05:15+00:00 Anonymous (anonymous@undisclosed.example.com) https://darwin.bioeng.ru/doku.php?id=doku.php_id_sidebar_do_edit&rev=1773414315&do=diff Navigation * Home * Portal Guide * Slurm Guide text/html 2026-04-13T19:36:42+00:00 Anonymous (anonymous@undisclosed.example.com) Hardware https://darwin.bioeng.ru/doku.php?id=hardware&rev=1776109002&do=diff Hardware Compute Resources Node CPU Model CPU Layout Memory GPU OS darwin (head node) Intel Xeon Silver 4210 20 CPUs, 1 socket, 10 cores/socket, 2 threads/core 32 GB --- Rocky Linux 9.7 node01 Intel Xeon E5-2630 v4 text/html 2026-04-13T18:36:13+00:00 Anonymous (anonymous@undisclosed.example.com) Hello there! https://darwin.bioeng.ru/doku.php?id=home&rev=1776105373&do=diff Hello there! This website provides documentation for Darwin HPC. Darwin is used by Integrative Biology and Structural Biotechnology groups for computational biology tasks such as molecular dynamics simulations, molecular docking, data analysis, cryo-EM data processing, bioinformatics pipelines and neural network training. text/html 2026-04-06T14:27:13+00:00 Anonymous (anonymous@undisclosed.example.com) Known Issues https://darwin.bioeng.ru/doku.php?id=known_issues&rev=1775485633&do=diff Known Issues * The web-portal throws an error when a user logs in after waiting for too long on the login page. To overcome this, remove everything after “portal.darwin.bioeng.ru” in the address bar and reload the page. * nglview does not work if frontend (nglview inside the environment from which the JupyterLab starts) and backend (nglview inside the environment with the kernel the user is using) versions do not match. nglview inside user environments should always be 3.1.4 (except for cas… text/html 2026-04-09T09:00:43+00:00 Anonymous (anonymous@undisclosed.example.com) https://darwin.bioeng.ru/doku.php?id=sidebar&rev=1775725243&do=diff Navigation * Home * Portal Guides * Basics * Advanced * Slurm * Migration from Newton * Application Guides * AlphaFold 3 * Hardware * Known Issues * Support text/html 2026-03-13T18:37:45+00:00 Anonymous (anonymous@undisclosed.example.com) Support https://darwin.bioeng.ru/doku.php?id=support&rev=1773427065&do=diff Support For technical issues, access requests, or suggestions, contact administrators: * Grigory Armeev * Vladimir Sidorov